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Abstracts van LezingenBiosimilars
or why proteins cannot be copied Some examples on factors influencing immunogenicity will be addressed. Comparability Assessment
Strategies and Techniques for Post-Approval CMC Changes Protein Analytical Chemistry, Genentech Inc. South San Francisco, CA, USA Comparability assessments require objective interpretation of a historical data set obtained using a comprehensive analytical approach. This presentation will describe Genentech’s current approach for demonstrating comparability for post-approval facility or process changes for therapeutic antibodies, and will highlight key limitations to our current analytical capabilities.
Development of Biosimilars: Binocrit®
- the worlds first biosimilar ESA as a case study
Biopharmaceutical medicines have great impact on the treatment of significant
diseases and demand for such medicines continues to increase. The expiry of
patent protection for major groups of biopharmaceutical medicines such as
epoetin or growth hormone has been followed by the introduction of a regulatory
pathway – the EMEA biosimilar-regulatory pathway - making it possible for
assessment, approval and introduction of new versions of these existing
biopharmaceutical medicines. Analytical
assessment of biotech product quality In this lecture, I will discuss analytical approaches to ensure biopharmaceutical product quality and consistency. The overall quality strategy includes product characterization during development, adherence to GMP, validated manufacturing process, raw materials testing, in-process testing, stability testing, release testing and specifications. Several examples of release testing and product characterization will be given in the lecture. Oral recombinant enzyme
replacement therapy: DMPK and Immunogenicity Assessment (A Case Study) SPEAKER ILL: WITHDRAWN < No abstract available yet >
THE CHALLENGES OF “LARGE MOLECULE”
LIGAND-BINDING ASSAYS - VALIDATION AND BIOANALYSIS Ligand-binding assays (LBA) are the bioanalytical method of choice for measuring macromolecule protein therapeutics. Large molecule LBAs, as opposed to the small molecule bioanalytical method LC-MS/MS, do not directly measure the molecule itself. Instead, LBAs indirectly measure a binding reaction that is highly dependent on the quality of the reagents used. This talk will discuss the unique challenges encountered during the validation and bioanalysis of ligand-binding assays. Immunogenicity
considerations for biologics
Abstracts van Posters
CHARACTERIZATION OF IMPURITIES AND
MODIFICATIONS IN PROTEIN PRODUCTS USING LIQUID CHROMATOGRAPHY AND DATA
INDEPENDENT ACQUISITION TANDEM MASS SPECTROMETRY Sequence variants, heterogeneity and modifications such as oxidation and deamidation are common in recombinant protein products and have the potential to affect the safety and activity of therapeutic protein drugs. Effective control and monitoring these variations require a sensitive and reproducible strategy to identify and quantify such product and process related impurities. We have applied an online Ultra Performance Liquid Chromatography –Data Independent Acquisition Tandem Mass Spectrometry (UPLC-MSE) approach to map protein digests. Yeast enolase and alcohol dehydrogenase (ADH) samples were used to demonstrate the proof of concept for identification and quantification of low-level impurities and multiple modifications in protein products. Tryptic digests of enolase or ADH were separated on a 2.1x100mm, 1.7µm C18 Acquity PST column, eluted and fragmented in a QTOF instrument. Data were acquired in a parallel data independent acquisition mode (MSE). High sequence coverage was achieved for the target proteins. Modified peptides at sub-stoichiometric abundances and peptides from low-level impurities were successfully characterized. For enolase sample, 95.5% sequence coverage was obtained for enolase 1, and four minor protein contaminants were identified. The impurity proteins were enolase 2, Cu-Zn superoxide dismutase, glucose-6-phosphate isomerase and triosephate isomerase at level of 13.4%, 13.3%, 3.1% and 1.4% related to enolase 1. Three asparagine deamidation sites (N70, N109 and N156) in enolase 1 were characterized at varying levels of modification (6.1%, 27.0% and 32.8%). Interestingly, several major LC peaks were found to be partially/non-tryptic peptides resulted from unexpected proleolytic cleavage. Similarly, two impurity proteins were determined from ADH sample, and 4 deamidated asparagines, 2 oxidized methionines and N-terminal acetylation were identified and quantified in ADH1. These results support that UPLC-MSE is capable of characterizing impurities and modifications in protein products. We are using this approach for analysis of a monoclonal antibody.
CHARACTERIZATION OF IMPURITIES AND
MODIFICATIONS IN PROTEIN PRODUCTS USING LIQUID CHROMATOGRAPHY AND DATA
INDEPENDENT ACQUISITION TANDEM MASS SPECTROMETRY Sequence variants, heterogeneity and modifications such as oxidation and deamidation are common in recombinant protein products and have the potential to affect the safety and activity of therapeutic protein drugs. Effective control and monitoring these variations require a sensitive and reproducible strategy to identify and quantify such product and process related impurities. We have applied an online Ultra Performance Liquid Chromatography –Data Independent Acquisition Tandem Mass Spectrometry (UPLC-MSE) approach to map protein digests. Yeast enolase and alcohol dehydrogenase (ADH) samples were used to demonstrate the proof of concept for identification and quantification of low-level impurities and multiple modifications in protein products. Tryptic digests of enolase or ADH were separated on a 2.1x100mm, 1.7µm C18 Acquity PST column, eluted and fragmented in a QTOF instrument. Data were acquired in a parallel data independent acquisition mode (MSE). High sequence coverage was achieved for the target proteins. Modified peptides at sub-stoichiometric abundances and peptides from low-level impurities were successfully characterized. For enolase sample, 95.5% sequence coverage was obtained for enolase 1, and four minor protein contaminants were identified. The impurity proteins were enolase 2, Cu-Zn superoxide dismutase, glucose-6-phosphate isomerase and triosephate isomerase at level of 13.4%, 13.3%, 3.1% and 1.4% related to enolase 1. Three asparagine deamidation sites (N70, N109 and N156) in enolase 1 were characterized at varying levels of modification (6.1%, 27.0% and 32.8%). Interestingly, several major LC peaks were found to be partially/non-tryptic peptides resulted from unexpected proleolytic cleavage. Similarly, two impurity proteins were determined from ADH sample, and 4 deamidated asparagines, 2 oxidized methionines and N-terminal acetylation were identified and quantified in ADH1. These results support that UPLC-MSE is capable of characterizing impurities and modifications in protein products. We are using this approach for analysis of a monoclonal antibody.
AN AUTOMATED LC/MS DATA ANALYSIS USING BIOPHARMALYNX: A CASE STUDY FOR
CHARACTERISATION OF THERAPEUTIC INTERFERON PROTEIN Liquid chromatography-Time of Flight Mass Spectrometry (LC/TOF-MS) has been extensively used in intact protein and peptide mapping analyses as an accurate analytical tool for protein characterization in biotherapeutic drug development. Conventionally, LC/TOF-MS data generated for these studies is interpreted either manually or being processed with a limited automation to confirm protein masses and peptide maps. They are time-consuming processes. Valuable protein information can be often missed due to the complexity of the samples during their data analyses. This poster describes the utilities of BiopharmaLynx, a new application manager designed for automated data processing and annotation. LC/TOF-MS analysis of recombinant interferon alpha was characterized using BiopharmaLynx. The results of automated data processing and peak annotation for intact protein and tryptic peptides are shown. Multiple batches of recombinant interferon expressed in two different cell conditions were compared qualitatively. Intact protein LC/MS data was deconvoluted to protein mass and its result was presented in user friendly browsers. Differences in protein modifications were assigned for control and analyte batches. Peptide mapping analysis in BiopharmaLynx also provides the abilities to identify and annotate peptide peaks based on their accurate molecular weight resulted from proteolytic digestion. 96 - 97 % coverage in Interferon peptide map was achieved. Modifications such as N-terminus acetylation, oxidation, and deamidation were identified for different batches. The comparison tools in the software allow direct differentiation of batches of samples. Detailed peptide information is displayed in tabulated format can be sorted and edited by user.
In vivo microdialysis in rats:
LC-MS/MS analysis of microdialysis samples
Microdialysis can be used to monitor chemicals (drugs) in
living tissues: microdialysis probes can be inserted in a blood vessel and
various other tissues (muscle, adipose tissue, liver, brain, kidney, lung, etc)
to obtain concentrations of the unbound drug. By doing so, the concentration of
the drug can be determined in situ and continuously followed in time. Our
hypothesis is that with the use of microdialysis the amount of animals can be
reduced in Pharmacokinetic/Pharmacodynamic studies, since one animal can be
continuously followed in time without sacrificing.
NEW APPLICATIONS OF QTRAP® AND TRIPLE QUADRUPOLE SYSTEMS IN PHARMACEUTICAL
ANALYSIS Identification and quantitation of the metabolites of drugs and xenobiotics is a central challenge to understanding mechanisms of efficacy and toxicity. Productive MetID requires identification of as many individual metabolites of a compound in a single experiment as possible. The TripleTrap™ switching capabilities of Q TRAP® systems gives definitive identification of more metabolites than any other mass spectrometry system. This contribution will describe workflows designed to exploit the unique capabilities of QTRAP systems and their application to solve real world problems in metabolite ID. In order to support high throughput Bioanalysis, advanced new quantitative workflows for triple quadrupole technology will be presented as well.
EMPLOYING HIGHER RESOLUTION TO OBTAIN BETTER SELECTIVITY FOR QUANTITATION
EXPERIMENTS ON A TRIPLE- QUADRUPOLE INSTRUMENT PLATFORM (API 5000TM LC/MS
SYSTEM) Triple quadrupole mass spectrometers have proven to provide a high degree of selectivity and sensitivity by utilizing specific unit mass selection in the Q1 and Q3 quadrupoles. This scan type is referred to as SRM or MRM in the literature and is typically performed using “unit resolution” at approximately 0.6 – 0.8 AMU peak width at half maximum (FWHM). There may be cases however in which an isobaric metabolite or interference from the matrix can not be separated using chromatography or eliminated in unit resolution. In these situations it becomes important to be able to take advantage of advances in instrument designs in their ability to achieve higher mass resolutions (~0.1-0.2 AMU at FWHM). With enhanced resolution, the isobaric interference can be partially or completely resolved resulting in accurate quantitative data.
A HIGHLY AUTOMATED WORKFLOW FOR FAST AND COMPREHENSIVE IDENTIFICATION OF
IMPURITIES AND DEGRADATION PRODUCTS IN PHARMACEUTICAL PRODUCTS USING LC/MS/MS. The analysis of forced degradation samples by LC-MS/MS is shown to accurately predict the major degradation product of a pharmaceutical drug product. A reduction in the incidences of failed stability studies and costs can be achieved by getting this information into the hands of development scientists earlier in the drug development process. A pharmacopeia related substances method was used with only minor modifications to the mobile phase buffer which eliminated costly method redevelopment. The modified method performed well with retention times for components matching those listed in the method. Software tools for compound optimization and method building simplified the study workflow reducing the dependence on highly trained and experienced operators to complete these types of studies.
HARDWARE AND SOFTWARE DESIGN STRATEGIES FOR THE RAPID DETERMINATION OF
OPTIMAL QUANTITATIVE MS/MS CONDITIONS A new algorithm for high throughput optimization of compounds was tested against the old version of the same algorithm. The design is in hopes that the new algorithm will produce more sensitive, accurate tunes in a high-throughput environment. The new algorithm also incorporates saturation control, therefore the user does not need to worry about using too high of a concentration for optimization. The new algorithm gives the option to do a second injection to fine tune the method created with the first, whereas in the older version a second injection was required in order to get MS/MS data. The data generated from the new and old algorithms was compared to determine which workflow produced more sensitive MRM methods.
ACCELERATED LC/MS/MS FOR THE QUANTITATION AND CONFIRMATION OF PESTICIDES IN
FOOD AND WATER SAMPLES Here we present
a high-throughput LC/MS/MS method for pesticide screening that combines:
EFFICIENT PEPTIDE PURIFICATION BY
HPLC, EFFECT OF PORE SIZE, PARTICLE SIZE AND CHEMISTRY. << no abstract received yet >>
YMC-BIOPRO, POROUS AND NONPOROUS IEX
COLUMNS. << no abstract received yet >>
LAMP-BASED NATIVE FLUORESCENCE DETECTION OF PHARMACEUTICAL
PROTEINS IN CAPILLARY ELECTROPHORESIS
In the last decade, capillary electrophoresis (CE) has demonstrated its
usefulness for the analysis of intact (i.e. non-digested, underivatised)
pharmaceutical proteins. In protein CE, detection is typically carried out using
UV absorbance detection at low wavelengths (200-220 nm), but unfortunately it
may provide low selectivity and unstable baselines. More selective detection of
proteins can be achieved by monitoring the native fluorescence of proteins.
Fluorescence detection in CE is commonly carried out using laser-induced
fluorescence detection (LIF). However, UV lasers present few spectral lines, are
expensive and have limited lifetimes. Lamp sources would provide a much wider
choice of excitation wavelengths.
METHOD VALIDATION APPROACH FOR THE DETERMINATION OF ANTIBODY
RESPONSE TO BIOPHARMACEUTICALS Abstract removed per request of Eurofins Medinet
DEVELOPMENT OF AN AUTOMATED SPR-IMER-LC-MS/MS PLATFORM FOR
ISOLATION, QUANTIFICATION AND IDENTIFICATION OF PROTEINS FROM PLASMA
Surface Plasmon Resonance (SPR) sensing is a well-known non-destructive optical
technique capable of detecting minute amounts of protein, binding to or
dissociating from receptor molecules immobilised on a sensor surface. The
combination of SPR and Mass Spectrometry (MS) provides a means for selective
binding, recovery and identification of specific proteins (i.e. based on their
molecular mass) from complex matrices. This approach is often referred to as
Biomolecular Interaction Analysis – Mass Spectrometry (BIA-MS) and facilitates
ligand fishing. In spite of the fact that direct coupling of both techniques can
be beneficial in terms of sample throughput, as a rule SPR and MS have been used
separately (off-line) due to the bulky nature of most of the current SPR
devices, their liquid handling and the use of chaotropic regeneration agents
used to recover material from the sensor surface, which may cause compatibility
problems with MS detection.
ELISA WITH ICP-MS DETECTION AS A SELECTIVE DETECTION TECHNIQUE
FOR BIOMARKER ASSAYS The aim of the study was to perform an ELISA in which a sensitivity enhancement was established and the matrix effect was reduced by using the biotin – streptavidin coupling and the ICP-MS as a detection system. In this study thyroid stimulating hormone (TSH) was determined in human serum samples using an sandwich ELISA with ICP-MS detection.
STATISTICAL EVALUATION OF THE BENEFIT OF COMBINED USE OF
ACCURATE MASS AND ISOTOPIC PATTERN
The quality of sum formula generation depends on: a) the preciseness of the mass
determination, b) the use of the isotopic pattern information and c) the
accuracy of the isotopic pattern measurement. The accurate mass and the isotopic
pattern provide two complementary dimensions, allowing a sum formula generation
for compounds of masses up to ~500 Da. If the molecular mass is higher,
additional information has to be used.
SOFTWARE-SUPPORTED TOP-DOWN PROTEIN SEQUENCE CHARACTERIZATION
AND ASSIGNMENT OF TERMINI
In a mass spectrometric Top-Down analysis using MALDI-ISD or ESI-ECD/ETD, the
undigested protein is subjected to fragmentation. This allows to partially
sequence the protein, to detect signal peptides, modifications, sequence
variations and mutations. As such data analysis can be time consuming, we
developed software tools to provide advanced Top-Down assignment of protein ID
and N- and Ctermini.
ADVANCES IN THE OPTIMIZATION OF A MICRO-FLOW HPLC (LC-MS)
SYSTEM
Current trends in HPLC system development have embraced higher pressures, higher
temperatures and lower flow rates to increase separation efficiency and
analytical throughput. By combining recent advances in microscale fluid
delivery, small particle (~ 3μm) stationary phases, high temperature separations
and chip-based UV absorbance detection to produce a fully integrated microflow
gradient HPLC system, the overall chromatographic performance has been optimized
for short cycle times, high
INTEGRATED BIOPHARMACEUTICAL DEVELOPMENT: NEW CHALLENGES TO
EXPIDITE THE PROOF-OF-CONCEPT STAGE AND TIME TO MARKET Biologics have been the major building blocks within Xendo’s life cycle of 18 years and still today are among the major drivers behind their success - if not becoming the most important one. With the establishment of a brand new cGMP compliant small-scale manufacturing facility next to the three early clinical development units and the bioanalytical laboratories, a full package of biologics research and development services has been accomplished. The entire package is suitable to provide major biotech companies as well as small virtual biotech start-ups highly integrated and high-level development programs.
(PRE)CLINICAL IMMUNOGENICITY ASSAY DEVELOPMENT The importance of evaluating the immunogenicity of biopharmaceuticals is generally accepted these days. One approach to measure immunogenicity is using Biacore technology. A versatile instrument for this task is the Biacore T100, especially due to its GLP/Part 11 compliancy. Immunogenicity analysis of animal and human samples imposes specific challenges on the Biacore assay development and the analysis of various sample matrices, e.g. serum, plasma, feces, requires a customized approach. Some specific issues relating to assay development for these complex matrices are highlighted, with emphasis on the biochemistry and immunochemistry at the sensor surface.
CIEF–MALDI-TOF-MS FOR THE ANALYSIS OF (BIOPHARMACEUTICAL) PROTEINS Complex protein mixtures can efficiently be separated by capillary isoelectric focusing (cIEF) (1). Hyphenation of cIEF to MALDI–TOF MS via a spotting device offers a powerful tool for the repeatable analysis of proteins in different application fields. However, the coupling of these two techniques is a matter of compromises; compounds that are necessary in cIEF like ampholytes, detergents and polymers cause signal suppression and are less suitable for MS detection (2). This presentation describes the use of a cIEF-UV–MALDI-TOF system for the analysis of a mixture of proteins and the applicability in degradation studies of biopharmaceutical compounds (3). 1) L.H.H. Silvertand, J. Sastre Toraño, W.P. van Bennekom, G.J.
de Jong, ‘Recent developments in capillary isoelectric focusing’, Journal of
Chromatography A 2008, 19, 157-70. | |||||
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